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After the column has been flushed, it is usually best to store the column in the flushing solvent (acetonitrile or methanol) until it is used again. To re-equilibrate to normal operating conditions, equilibrating with 1020 column volumes of mobile phase usually is sufficient.
Column Equilibrating A buffer that is compatible with the protein of interest and the resin of choice is passed over the column. Prior to sample application, the resin is therefore equilibrated in a buffer of high ionic strength.
To equilibrate the column with buffer just means to run the column with the buffer only for a while.
Equilibrating buffer provides a condition to ensure that the target molecules interact effectively with the ligand and are retained by the affinity medium as all other molecules wash through the column. So the buffer pH and ionic strength at optimal condition are responsible for this ligand-molecule interaction. I hope
In other words, the slurry inside the column should never be allowed to dry out. If this happens it may create cracks and unevenness in the solid phase, which will decrease the efficiency of the separation. The sample to be separated is loaded in solution in a suitable solvent, preferably as concentrated as possible.
Re: Column Volume Calculation “column volume” is a bit ambiguous. The bed volume (volume of resin in the column) is easy: V = 1/4 * (pi * dc^2 * L) where DC is the radius of the column (half the diameter) and L is the length. The “void volume” (Vm = the amount of mobile phase in the column) is a bit more complex.
1-The equation for the volume of a column is the radius of the column squared in mm multiplied by pi (3.1416) multiplied by the column length in mm, quantity divided by 1000 [corrected formula for units]. This affords the mm^3 or mL unit.
PD = pore diameter in Angstroms (Å) PV = pore volume in mL/g. SA = surface area in m2/g. 40,000 = a unit conversion constant.

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