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Categorized views of R package repositories with structures for vocabularies and narratives of views, which can be used to create HTML views of the package structure in a Bioconductor repository.
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How to fill out biocviews

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How to fill out biocViews

01
Visit the Bioconductor website and navigate to the biocViews section.
02
Identify the appropriate categories that match your package's functionality.
03
For each category, click on the corresponding checkbox to select it.
04
Provide a brief description of how your package fits into each selected category.
05
Fill out any additional required fields or information as specified on the page.
06
Review your entries for accuracy and completeness before submitting.

Who needs biocViews?

01
Package developers who are submitting their work to Bioconductor.
02
Researchers and users looking for specific tools within Bioconductor.
03
The Bioconductor community that benefits from organized package information.
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People Also Ask about

biocViews terms are “keywords” used to describe a given package. They are broadly divided into four categories, representing the type of packages present in the Bioconductor Project. Software. Annotation Data. Experiment Data.
'biocViews' are directed acyclic graphs of terms from a controlled vocabulary. There are three major classifications, corresponding to 'software', 'annotation', and 'experiment data' packages.
The Bioconductor project provides software for associating microarray and other genomic data in real time to biological metadata from web databases such as GenBank, LocusLink and PubMed (annotate package).
However, whereas CRAN is a general purpose repository, Bioconductor focuses on software tailored for genomic analysis.
The Bioconductor project provides software for associating microarray and other genomic data in real time to biological metadata from web databases such as GenBank, LocusLink and PubMed (annotate package).

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biocViews is a classification system used in the Bioconductor project to categorize software packages according to their specific areas of application and functionality.
Package maintainers of Bioconductor software are required to file biocViews to ensure proper classification and visibility of their packages.
To fill out biocViews, package maintainers need to include relevant terms in the DESCRIPTION file of their R packages, indicating the areas of interest their package addresses.
The purpose of biocViews is to facilitate the discovery of Bioconductor packages by providing a structured way to categorize them based on their specific functions and applications in bioinformatics.
The information that must be reported on biocViews includes keyword terms that relate to the package's functionality, areas of application, and relevant biological concepts.
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