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Simulation Experiment Description Markup Language (MEDAL) : Level 1 Version 3 December 31, 2017EditorsFrank T Bergmann Jonathan Cooper Matthias König Ion Moreira David Nickerson Nicolas Le Novae Brett
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To fill out an sed-ml level 1 version, follow these steps:
02
Start by opening the sed-ml level 1 version file in a text editor or an XML editor.
03
Familiarize yourself with the structure of the sed-ml file, which consists of several main elements such as the model, simulation, and tasks.
04
Begin by defining the model(s) that will be used in the simulation. This includes specifying the model language and providing the necessary details and location of the model file.
05
Define the simulation settings, such as the algorithm to be used, the duration of the simulation, and any additional parameters or restrictions.
06
Specify the various tasks to be performed during the simulation, such as the types of data to be recorded or the changes to be made to the model.
07
Ensure that each element is properly structured and nested within the appropriate parent elements, following the sed-ml XML schema.
08
Save the sed-ml level 1 version file and validate it against the schema to ensure its correctness.
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The file is now ready for use in simulating and analyzing biological models according to the specifications provided.

Who needs sed-ml level 1 version?

01
sed-ml level 1 version is primarily needed by researchers, scientists, and modelers working in the field of systems biology.
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It is useful for anyone who wants to simulate and analyze biological models in a standardized and reproducible manner.
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sed-ml level 1 version provides a framework for encoding simulation experiments, allowing researchers to easily share, compare, and reproduce their findings.
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It is particularly valuable for those studying complex biological systems or conducting computational experiments.
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Additionally, software developers and tool creators who build simulation and analysis tools for biological models can benefit from sed-ml level 1 version as it provides a common language and structure for interoperability.
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{"version":"Level 1"}
{"required":"All researchers using SED-ML"}
{"instructions":"Follow the guidelines provided on the SED-ML website"}
{"purpose":"To specify computational simulation experiments in a standardized format"}
{"information":"Details of the simulation setup, models used, and expected outcomes"}
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