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Pipeline Documentation
Release 2.1.1Errol Strain, An Duo, James Pettengill, Hugh A. Rand, Steve Davis Sep 10, 2019Contents1CFSAN SNP Pipeline
1.1 Introduction. . . . . . . . . . . . . . . . . . .
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What is cfsan snp pipeline an?
The CFSAN SNP Pipeline (CFSAN Single Nucleotide Polymorphism Pipeline) is a bioinformatics tool used by the FDA's Center for Food Safety and Applied Nutrition to analyze whole genome sequence data.
Who is required to file cfsan snp pipeline an?
Food manufacturers, processors, and distributors who are regulated by the FDA may be required to submit data through the CFSAN SNP Pipeline.
How to fill out cfsan snp pipeline an?
The CFSAN SNP Pipeline is typically filled out by uploading whole genome sequence data files and following the instructions provided by the FDA.
What is the purpose of cfsan snp pipeline an?
The purpose of the CFSAN SNP Pipeline is to help the FDA identify and track foodborne pathogens, investigate outbreaks, and enhance food safety measures.
What information must be reported on cfsan snp pipeline an?
The CFSAN SNP Pipeline requires submission of whole genome sequence data of foodborne pathogens and relevant metadata such as sample origin, processing details, and contact information.
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