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University of South CarolinaScholar Commons
Theses and Dissertations2018Parental experience with wholesome sequencing
reanalysis and its impact on the diagnostic odyssey
Nicole D. Lucas
University
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01
To fill out whole-exome sequencing, follow these steps:
02
Obtain the DNA sample from the patient or participant for whom the sequencing will be performed.
03
Prepare the DNA sample by extracting it from the cells (usually blood or tissue samples) and purifying it.
04
Quantify the amount and quality of the extracted DNA using a specialized instrument.
05
Prepare the sequencing library by fragmenting the DNA and attaching specific adapters to the fragments.
06
Amplify the DNA fragments with the attached adapters to obtain sufficient material for sequencing.
07
Perform the sequencing using high-throughput sequencing platforms, such as Illumina sequencing machines.
08
Analyze the sequencing data by aligning the reads to a reference genome and identifying genetic variants.
09
Interpret the genetic variants by comparing them to known databases and scientific literature.
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Generate a comprehensive report summarizing the identified genetic variants and their potential implications.
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Discuss the results with the patient or participant and provide appropriate genetic counseling if necessary.
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Store the sequencing data and associated metadata for future reference and potential re-analysis.
Who needs whole-exome sequencing and its?
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Whole-exome sequencing is typically recommended for individuals with suspected genetic disorders or diseases that may have a genetic component.
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It can also be used for research purposes to study the genetic basis of various conditions or to identify potential therapeutic targets.
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Some specific groups of individuals who may benefit from whole-exome sequencing include:
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- Patients with undiagnosed or rare diseases
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- Individuals with a family history of genetic disorders
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- Cancer patients to determine somatic mutations
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- Developmental delay or intellectual disability patients
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- Couples planning to have children to screen for carrier status
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- Research participants in genomic studies
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In general, whole-exome sequencing helps in identifying genetic variants that may contribute to a particular condition or provide insights into disease mechanisms.
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What is whole-exome sequencing and its?
Whole-exome sequencing (WES) is a technique used to sequence all the protein-coding regions of genes in a genome. It focuses on the exons, which are the parts of the DNA that are translated into proteins, allowing researchers to identify genetic variants associated with diseases.
Who is required to file whole-exome sequencing and its?
Generally, whole-exome sequencing is required for clinical genetic testing in individuals with unexplained genetic disorders, conditions requiring a precise diagnosis, or in research settings. Patients, healthcare providers, or laboratories may be involved in the filing process.
How to fill out whole-exome sequencing and its?
To fill out whole-exome sequencing requests, one typically needs to provide patient demographics, clinical history, consent forms, and any previous genetic testing results. Specific forms are provided by the testing laboratories or clinical genetic services.
What is the purpose of whole-exome sequencing and its?
The purpose of whole-exome sequencing is to detect genetic mutations that may be responsible for inherited diseases, investigate the genetic basis of complex conditions, guide treatment options, and advance personalized medicine.
What information must be reported on whole-exome sequencing and its?
Information that must be reported includes the variant call format (VCF) of detected mutations, clinical significance of variants, patient genotype data, recommendations for further testing, and details of the consent process.
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