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F1000Research 2016, 5:1542 Last updated: 28 JUN 2017SOFTWARETOOLARTICLETCGAWorkflow: Analyze cancer genomics andepigenomics data using Bioconductor packages version 2; referees: 1 approved, 2 approved
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The TCGA workflow for analyzing cancer refers to the systematic process used by The Cancer Genome Atlas to collect, analyze, and interpret genomic and clinical data related to various types of cancer.
Researchers and institutions involved in cancer research and utilizing TCGA data must file the TCGA workflow to report their findings and methodologies.
To fill out the TCGA workflow, users must complete specified sections detailing their research methodologies, data analysis, and results, usually using designated online platforms or submission systems employed by TCGA.
The purpose of the TCGA workflow is to ensure standardized reporting of cancer research findings, facilitate data sharing, and promote collaborative efforts among researchers to understand cancer genomics better.
Researchers must report information including study objectives, methods used for data analysis, results obtained, and any relevant demographic and clinical data associated with the cancer samples studied.
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